Enzymatic Conjugation

Enzymatic conjugation is an advanced bioconjugation technology that uses specific enzymes to catalyze reactions and achieve highly controlled conjugation at predefined antibody sites. In the development and commercialization of antibody–drug conjugates (ADCs), enzymatic conjugation is gradually replacing traditional random chemical methods, becoming a key approach for constructing ADCs with high homogeneity, stability, and predictable in vivo behavior. As a technology-driven company focused on ADC products and services, BOC Sciences leverages a mature enzyme engineering platform and antibody modification expertise to provide clients with full-process enzymatic conjugation solutions, covering critical steps from feasibility assessment and antibody engineering design to process scale-up and quality analysis.

What is Enzymatic Conjugation?

Diagram showing site-specific enzymatic conjugation of an ADC

The therapeutic index, safety, and clinical success of ADCs largely depend on the conjugation strategy. Random lysine or cysteine conjugation often results in wide drug-to-antibody ratio (DAR) distributions and high structural heterogeneity, impacting pharmacokinetics and increasing toxicity risk. In contrast, enzymatic conjugation enables site-specific modification and precise DAR control, significantly improving ADC critical quality attributes (CQA) and emerging as a core technology for next-generation ADC design. This method uses enzymes that recognize specific amino acid tags to achieve site-specific antibody conjugation. Additionally, by inserting specific amino acid tags into the antibody sequence, payloads can be selectively attached. These tags are recognized by specific enzymes, such as formylglycine generating enzyme (FGE), microbial transglutaminase (MTG), sortase, or tyrosinase, enabling precise site-specific conjugation.

Main Enzymatic Conjugation Platforms for ADCs

BOC Sciences' enzymatic conjugation services focus on ADC development, following the design principle of "precision, controllability, and scalability" to provide high-quality conjugation solutions for innovative ADCs and various bioconjugates. Through a mature enzymatic conjugation technology platform, we can design defined and highly reproducible antibody conjugation sites, precisely control DAR with narrow distribution, and preserve both antigen-binding activity and Fc function, meeting the strict requirements for structural homogeneity and quality consistency in preclinical studies and IND submissions.

Transglutaminase (TGase) Conjugation

Transglutaminase is one of the most established enzymatic conjugation tools in the ADC field. It catalyzes the formation of stable covalent amide bonds between specific glutamine residues and primary amine linkers or drug molecules. BOC Sciences can assist clients in glutamine site selection, antibody sequence optimization, and scale-up of conjugation conditions.

  • Technical Advantages:
  • Compatible with natural or engineered antibodies.
  • Enables common DAR designs such as DAR 2 / DAR 4.
  • Mild reaction conditions, adaptable to various linker–payload systems.

Fc Glycoengineering-based Conjugation

The antibody Fc region naturally contains N-linked glycans, making it an ideal site for site-specific modification. By combining glycosidases and glycosyltransferases, functional groups can be introduced at the Fc glycan termini for precise conjugation. This strategy is particularly suitable for ADC projects requiring stringent PK/PD behavior.

  • Technical Advantages:
  • Does not interfere with the antigen-binding (Fab) region.
  • Preserves FcRn binding and immune effector functions.
  • Highly homogeneous product structure with excellent batch consistency.

Sortase A-mediated Site-specific Conjugation

Sortase A is a transpeptidase recognizing short peptide motifs (e.g., LPXTG), allowing highly controlled modular conjugation at the antibody C-terminus or Fc region. BOC Sciences provides one-stop technical support from tag design to conjugation validation.

  • Technical Advantages:
  • Exploration of novel ADC architectures.
  • Multifunctional ADCs or bispecific conjugates.
  • Rapid construction and screening of early candidate molecules.

Formylglycine Generating Enzyme (FGE)-mediated Conjugation

FGE catalyzes the conversion of specific cysteine residues to formylglycine (fGly), introducing unique and highly reactive aldehyde functional groups on the antibody. BOC Sciences offers full technical support from antibody sequence engineering and FGE modification to payload conjugation and structural characterization.

  • Technical Advantages:
  • Highly site-specific.
  • Strong orthogonality in conjugation reactions.
  • Supports precise DAR control.

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Key Advantages and Platform Capabilities of Enzymatic Conjugation

01

Site-specific Conjugation

BOC Sciences employs multiple enzymatic conjugation strategies to achieve precise modification at predefined antibody sites, avoiding the structural heterogeneity of traditional random conjugation and ensuring consistent ADC configurations for reliable efficacy and safety studies.

02

Precise DAR Control

By systematically optimizing enzyme reaction parameters and engineered antibody sites, we achieve accurate DAR control with narrow distribution, significantly improving therapeutic index, reducing toxicity risk, and meeting high-quality candidate screening requirements.

03

Stable Linkage Strategies

BOC Sciences selects stable enzymatic covalent linkages to reduce in vivo payload detachment and ensures ADC stability during storage and in physiological conditions through systematic structural characterization.

04

Optimized PK/PD Performance

Site-specific and structurally homogeneous ADCs provide more predictable pharmacokinetics and pharmacodynamics. Our enzymatic conjugation strategies minimize clearance variability, supporting smooth transition of ADC projects into clinical development.

05

Multi-platform Technological System

With mature platforms including Transglutaminase, Glycoengineering, Sortase A, and FGE, BOC Sciences has comprehensive laboratory and analytical capabilities to flexibly meet diverse ADC architectures and technical requirements.

06

One-stop Customer Support

We provide end-to-end services from conjugation design, process development, to quality analysis, while supporting highly customized solutions and long-term technical collaboration. Continuous communication and professional support enable efficient advancement of ADC projects.

ADC Enzymatic Conjugation Service Workflow

Project Assessment and Technical Route Planning

Project Assessment and Technical Route Planning

Based on antibody structure, target information, payload type, and desired DAR, we comprehensively evaluate ADC design requirements, select the most suitable enzymatic conjugation strategy, and establish a feasible, scalable technical route.

Antibody Engineering and Site Design

Antibody Engineering and Site Design

For site-specific conjugation, we perform antibody sequence analysis and engineering design, including Fc modification, specific enzyme recognition sites, or peptide tag insertion, while assessing structural stability and functional impact.

Enzymatic Conjugation Reaction Development and Optimization

Enzymatic Conjugation Reaction Development and Optimization

For the selected enzymatic system, we optimize enzyme amount, reaction time, temperature, pH, and substrate ratio to improve conjugation efficiency, control side reactions, and ensure structural homogeneity and reproducibility of ADCs.

ADC Purification and Critical Quality Attribute Characterization

ADC Purification and Quality Attribute Characterization

We use multiple purification strategies to remove unconjugated components and free payload, and systematically analyze DAR distribution, molecular integrity, and aggregation levels using LC–MS, HIC, SEC-HPLC, and other methods.

Process Scale-up and Batch Consistency Verification

Process Scale-up and Batch Consistency Verification

Based on lab optimization, we support ADC preparation from milligram to gram scale, and verify conjugation efficiency, DAR distribution, and structural consistency across batches to meet preclinical research requirements.

Data Delivery and Technical Support

Data Delivery and Technical Support

We provide complete process parameters, analytical data, and technical reports, and continue offering optimization advice and technical support throughout the project, facilitating efficient advancement of ADC development.

Frequently Asked Questions(FAQs)

Frequently Asked Questions

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1 What is enzymatic conjugation?

Enzymatic conjugation is a technique that uses specific enzymes to achieve site-specific conjugation at predefined antibody locations. Compared to traditional random chemical conjugation, this approach significantly reduces structural heterogeneity, enables precise DAR control, and helps improve ADC stability, safety, and clinical predictability.

2 How does enzymatic conjugation differ from lysine or cysteine conjugation?

Lysine and cysteine conjugations are typically random modifications, often resulting in wide DAR distributions and high batch-to-batch variability. Enzymatic conjugation, in contrast, relies on the high specificity of enzymes to react at fixed positions, producing structurally homogeneous, high-quality ADC configurations.

3 What DAR designs can enzymatic conjugation achieve?

With rational site selection and optimized reaction conditions, enzymatic conjugation can typically achieve mainstream designs such as DAR 2 or DAR 4 while maintaining narrow distributions. BOC Sciences can assist in developing the optimal DAR strategy based on payload characteristics and project requirements.

4 Does enzymatic conjugation affect antibody binding activity?

Properly designed enzymatic conjugation is usually positioned in the Fc region or away from the antigen-binding site, avoiding interference with antibody recognition. Through systematic engineering and functional evaluation, BOC Sciences maximizes the retention of antibody activity and Fc-mediated functions.

5 Which enzymatic conjugation platforms do you support?

We support multiple mainstream ADC enzymatic conjugation technologies, including Transglutaminase, Fc glycoengineering, Sortase A, and FGE-mediated strategies, providing flexibility to accommodate different antibody structures and linker–payload systems.

6 Do you provide ADC analysis and quality support after enzymatic conjugation?

Yes. We offer comprehensive ADC structural and quality characterization services, including DAR distribution, purity, aggregation, and stability analysis, ensuring that enzymatically conjugated ADCs meet critical quality attribute requirements for R&D and regulatory submissions.

Case Study

Case Study 1 - Construction of a Highly Homogeneous ADC via Glycan Conjugation

Background

A U.S. biopharmaceutical company was developing an ADC targeting solid tumors, aiming to construct a DAR 4, highly homogeneous ADC for preclinical animal studies. Traditional lysine conjugation led to heterogeneous ADCs, wide drug-load distributions, and partial loss of antibody binding activity, affecting pharmacokinetics (PK). The client sought site-specific conjugation to improve ADC quality and predictability while maintaining scalable production.

How BOC Sciences Helped

BOC Sciences analyzed the client's antibody structure and payload properties and recommended a Transglutaminase (TGase)-mediated enzymatic conjugation strategy. Our team provided full-process technical support, including:

  • Antibody glutamine site analysis and engineering design
  • Optimization of reaction conditions to achieve precise DAR control
  • Evaluation of process scalability to ensure preclinical-scale production feasibility
  • Systematic characterization and functional validation of conjugated ADCs

This approach enabled the client to achieve highly homogeneous conjugation while preserving antibody antigen-binding activity and Fc functions.

Implementation

  1. Antibody Site Selection and Engineering: Analyzed natural glutamine residues in the Fc region, identified suitable TGase conjugation sites, and fine-tuned sequences to optimize enzyme accessibility.
  2. Conjugation Reaction Development: Optimized enzyme concentration, payload amount, and reaction time under neutral pH and low-temperature conditions to achieve DAR 4.
  3. ADC Purification and Characterization: Used HIC-HPLC to separate unconjugated components and assessed DAR distribution, integrity, and aggregation levels by LC–MS and SEC-HPLC.
  4. Process Scale-up Verification: After laboratory optimization, scaled up production to gram scale, ensuring batch consistency and reproducibility.

Results

  • Precise DAR Control: Final ADC achieved an average DAR of 4 with a narrow distribution, showing significantly improved structural homogeneity compared to random conjugation.
  • Retention of Antibody Activity: Antigen-binding activity remained ≥95%, and Fc function was preserved, supporting subsequent in vivo PK/PD studies.
  • Successful Scalable Process: Laboratory-scale production successfully scaled to gram level with consistent batch-to-batch performance.
  • Accelerated R&D: The client obtained stable, predictable ADC samples for preclinical studies, significantly shortening the candidate optimization cycle.

Publications

Browse BOC Sciences' publications to explore articles from research teams worldwide, showcasing the scientific contributions of our products and services in cutting-edge drug development.

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